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Generation of huge bibliography database automatically from sequence database

We sometimes want to know part of or all of references appeared in a database. When number of cited references is huge, it is not easy to make a bibliography table. Program make_bib makes a bibliography database for BIBTeX [Lamport, 1995].

For example:



extract_fields actin.pl actin.bib.pl ENTRY REFERENCE
make_bib actin.bib.pl actin.bib



The following bibliography database for BIBTeX is generated:



@article{ATAX,
  author = "Nellen, W. and  Gallwitz, D.",
  journal = "J. Mol. Biol. ",
  title = "Actin genes and actin messenger RNA in
      Acanthamoeba castellanii. Nucleotide sequence of the split actin gene
      I.",
  volume =  159,
  pages = "1--18",
  year = 1982
}

@article{ATAXE,
  author = "Edman, U. and  Meza, I. and  Agabian, N.",
  journal = "Proc. Natl. Acad. Sci. U.S.A. ",
  title = "Genomic and cDNA actin sequences from a virulent strain
      of Entamoeba histolytica.",
  volume =  84,
  pages = "3024--3028",
  year = 1987
}





Satoshi OOta
1999-03-06