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Provided modules

Predefined modules are:

nj
The neighbor joining method.
traverse
The maximum likelihood method (for amino acids).
traversen
The maximum likelihood method (for nucleotides).
ancestor
Inference of ancestral sequences.
dismat
Computation and operation of distance matrix.
format
Formatting sequence data file.
list
Operation of list data.
otermio
Input/Output of prolog-like terms.
sim
Simulation (for amino acids).
simn
Simulation (for nucleotides).
string
Operation of strings.
seq
Operation of sequence data (1).
seq2
Operation of sequence data (2).
tree
Operation of tree structure data.
probability
Computation of probability.



Satoshi OOta
1999-03-06