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Predefined modules are:
- nj
- The neighbor joining method.
- traverse
- The maximum likelihood method (for amino acids).
- traversen
- The maximum likelihood method (for nucleotides).
- ancestor
- Inference of ancestral sequences.
- dismat
- Computation and operation of distance matrix.
- format
- Formatting sequence data file.
- list
- Operation of list data.
- otermio
- Input/Output of prolog-like terms.
- sim
- Simulation (for amino acids).
- simn
- Simulation (for nucleotides).
- string
- Operation of strings.
- seq
- Operation of sequence data (1).
- seq2
- Operation of sequence data (2).
- tree
- Operation of tree structure data.
- probability
- Computation of probability.
Satoshi OOta
1999-03-06